Read_Report_Summaries_Abund — Read_Report_Summaries

helper function to read in abundance at age reports from EchoPro from different cases as well as with different methods (age1+ (full age) and age2+ methods). Right now just tested for age-2+ results for both methods

Usage

Read_Report_Summaries_Abund(
  SurveyName,
  DirNameFile,
  repcases,
  year,
  reportpath,
  hakeflag = 2
)

Arguments

repcases:: a list of cases (will correspond to subfolder names) of reports to read in.
year:: the year (used as a subfolder)
reportpath:: the base path that the script will look for the (year then) case subfolders in
hakeflag:: adult hake (hakeflag=2), not filtering for hake (hakeflag=-1), age-0 hake (hakeflag=0), age-1 hake only(hakeflag=1), all hake (hakeflag=3), age-1+ (hakeflag=4). set to 1 if want age1+ numbers, set to 0 (or other number) if want age2+. Defaults to age2+

Examples

 if (FALSE) { # \dontrun{
Blist<-Read_Report_Summaries_Abund(repcases, year, reportpath, hakeflag)
} # }